These CCS functions (icdDxToCCS and icdDxToCCSLvl) collapse ICD codes into a smaller number of clinically meaningful categories that are more useful for presenting descriptive statistics than individual ICD diagnostic codes are.
CCS classification for ICD-9 and ICD-10 codes is a diagnostic categorization scheme that can employ in many types of projects analyzing data on diagnoses.
icdDxToCCS(
dxDataFile,
idColName,
icdColName,
dateColName,
icdVerColName = NULL,
icd10usingDate = NULL,
isDescription = TRUE
)
icdDxToCCSLvl(
dxDataFile,
idColName,
icdColName,
dateColName,
icdVerColName = NULL,
icd10usingDate = NULL,
CCSLevel = 1,
isDescription = TRUE
)A data frame object of clinical diagnostic data with at least 3 columns: ID, ICD, and Date. As for date column, the data format should be YYYY/MM/DD or YYYY-MM-DD.
Column name of ID column in dxDataFile. Data type of this argumant should be string without quotation marks.
Column name of ICD column in dxDataFile. Data type of this argumant should be string without quotation marks.
Column name of date column in dxDataFile, and the type of date column should be a date format in R or a string format with date information in YYYY/MM/DD or YYYY-MM-DD. Data type of this argumant should be string without quotation marks.
(Optional) Column name if there is a columns to record ICD-9/10 version used in dxDataFile. In this column, data format should be numeric 9L or 10L to indicate which ICD version is used for each cell. See examples below to get more information.
The date that ICD-10 was started to be used in dxDataFile dataset. The data format should be YYYY/MM/DD or YYYY-MM-DD. Necessary if icdVerColName is null.
Binary. If true, category description of classification methods will be used in the group column. If false, category name will be used. By default, it is set to be True (standard category description).
Numeric. Used for multi-level CCS. By default, it is set to 1. There is 4 multi-level CCS (1~4) for ICD-9, and 2 multi-level CCS (1 and 2) for ICD-10.
Three new data.tables. 1) groupedDT: Based on dxDataFile with two new columns for uniform format diagnostic codes and classified categories. 2) summarised_groupedDT: Summarized the groupedDT dataset and sorted by memberID. 3) Error: Potential error codes from standardization step: dxUniform (icdDxShortToDecimal and icdDxDecimalToShort).
Notice: CCS stopped updating since 2019, replacing by Clinical Classifications Software Refined (CCSR). dxCCSR (icdDxToCCSR) function is also provided.
Other code classification functions: dxCCSR (icdDxToCCSR), dxPheWAS (icdDxToPheWAS), dxCustom (icdDxToCustom and icdDxToCustomGrep), dxComorbid (icdDxToComorbid).
# sample file for example
head(sampleDxFile)
#> ID ICD Date Version
#> 1: A2 Z992 2020-05-22 10
#> 2: A5 Z992 2020-01-24 10
#> 3: A8 Z992 2015-10-27 10
#> 4: A13 Z992 2020-04-26 10
#> 5: A13 Z992 2025-02-02 10
#> 6: A15 Z992 2023-05-12 10
# Group diagnostic codes into single level of CCS classification
icdDxToCCS(sampleDxFile, ID, ICD, Date, icd10usingDate = "2015-10-01", isDescription = TRUE)
#> Wrong ICD format: total 9 ICD codes (the number of occurrences is in brackets)
#> c("A0.11 (20)", "E114 (8)", "Z9.90 (6)", "F42 (6)", "001 (5)", "75.52 (4)", "755.2 (3)", "123.45 (3)", "7552 (2)")
#>
#> Wrong ICD version: total 7 ICD codes (the number of occurrences is in brackets)
#> c("V27.0 (18)", "A01.05 (8)", "42761 (7)", "V24.1 (6)", "A0105 (5)", "E03.0 (4)", "650 (4)")
#>
#> Warning: The ICD mentioned above matches to "NA" due to the format or other issues.
#> Warning: "Wrong ICD format" means the ICD has wrong format
#> Warning: "Wrong ICD version" means the ICD classify to wrong ICD version (cause the "icd10usingDate" or other issues)
#> $groupedDT
#> Short ID ICD Date CCS_CATEGORY_DESCRIPTION
#> 1: Z992 A2 Z992 2020-05-22 Chronic kidney disease
#> 2: Z992 A5 Z992 2020-01-24 Chronic kidney disease
#> 3: Z992 A8 Z992 2015-10-27 Chronic kidney disease
#> 4: Z992 A13 Z992 2020-04-26 Chronic kidney disease
#> 5: Z992 A13 Z992 2025-02-02 Chronic kidney disease
#> ---
#> 296: 650 C2 650 2017-10-10 <NA>
#> 297: 650 D4 650 2022-04-04 <NA>
#> 298: 123.45 C3 123.45 2022-09-28 <NA>
#> 299: 123.45 D8 123.45 2018-06-17 <NA>
#> 300: 123.45 C0 123.45 2017-05-09 <NA>
#>
#> $summarised_groupedDT
#> ID CCS_CATEGORY_DESCRIPTION
#> 1: A0 Chronic kidney disease
#> 2: A1 Chronic kidney disease
#> 3: A10 Chronic kidney disease
#> 4: A11 Chronic kidney disease
#> 5: A12 Chronic kidney disease
#> 6: A13 Chronic kidney disease
#> 7: A14 Chronic kidney disease
#> 8: A15 Chronic kidney disease
#> 9: A15 Acute and unspecified renal failure
#> 10: A16 Chronic kidney disease
#> 11: A16 Acute and unspecified renal failure
#> 12: A17 Chronic kidney disease
#> 13: A18 Acute and unspecified renal failure
#> 14: A18 Chronic kidney disease
#> 15: A2 Chronic kidney disease
#> 16: A3 Chronic kidney disease
#> 17: A4 Chronic kidney disease
#> 18: A5 Chronic kidney disease
#> 19: A6 Chronic kidney disease
#> 20: A7 Chronic kidney disease
#> 21: A7 Acute and unspecified renal failure
#> 22: A8 Chronic kidney disease
#> 23: A9 Chronic kidney disease
#> 24: A9 Acute and unspecified renal failure
#> 25: B0 Chronic kidney disease
#> 26: B0 Acute and unspecified renal failure
#> 27: B1 Acute and unspecified renal failure
#> 28: B1 Chronic kidney disease
#> 29: B2 Chronic kidney disease
#> 30: B2 Acute and unspecified renal failure
#> 31: B3 Chronic kidney disease
#> 32: B4 Chronic kidney disease
#> 33: C0 Melanomas of skin
#> 34: C0 Cancer of bladder
#> 35: C0 Cancer of brain and nervous system
#> 36: C0 Cancer of head and neck
#> 37: C1 Cancer of brain and nervous system
#> 38: C1 Cancer of head and neck
#> 39: C1 Cancer of breast
#> 40: C1 Cancer of bronchus; lung
#> 41: C1 Other non-epithelial cancer of skin
#> 42: C2 Cancer; other and unspecified primary
#> 43: C2 Cancer of bronchus; lung
#> 44: C2 Malignant neoplasm without specification of site
#> 45: C2 Cancer of head and neck
#> 46: C2 Anxiety disorders
#> 47: C3 Melanomas of skin
#> 48: C3 Cancer of colon
#> 49: C3 Cancer of other urinary organs
#> 50: C3 Other non-epithelial cancer of skin
#> 51: C3 Cancer of breast
#> 52: C3 Cancer of rectum and anus
#> 53: C4 Cancer of cervix
#> 54: C4 Cancer of bladder
#> 55: C4 Cancer of testis
#> 56: C4 Other non-epithelial cancer of skin
#> 57: C4 Cancer of breast
#> 58: C4 Cancer of head and neck
#> 59: C4 Anxiety disorders
#> 60: D0 Rheumatoid arthritis and related disease
#> 61: D0 Gastrointestinal hemorrhage
#> 62: D0 Mood disorders
#> 63: D0 Spondylosis; intervertebral disc disorders; other back problems
#> 64: D0 Anxiety disorders
#> 65: D1 Rheumatoid arthritis and related disease
#> 66: D1 Other liver diseases
#> 67: D1 Hypertension with complications and secondary hypertension
#> 68: D1 Nutritional deficiencies
#> 69: D2 Other complications of pregnancy
#> 70: D2 Substance-related disorders
#> 71: D2 Non-Hodgkin`s lymphoma
#> 72: D2 Heart valve disorders
#> 73: D3 Epilepsy; convulsions
#> 74: D3 Complication of device; implant or graft
#> 75: D3 Other nutritional; endocrine; and metabolic disorders
#> 76: D3 Schizophrenia and other psychotic disorders
#> 77: D3 Anxiety disorders
#> 78: D4 Non-Hodgkin`s lymphoma
#> 79: D4 Diabetes mellitus with complications
#> 80: D4 Hypertension complicating pregnancy; childbirth and the puerperium
#> 81: D4 Late effects of cerebrovascular disease
#> 82: D5 Non-Hodgkin`s lymphoma
#> 83: D5 Rheumatoid arthritis and related disease
#> 84: D5 Asthma
#> 85: D5 Heart valve disorders
#> 86: D6 Diabetes mellitus with complications
#> 87: D6 Rheumatoid arthritis and related disease
#> 88: D6 Substance-related disorders
#> 89: D6 Other hereditary and degenerative nervous system conditions
#> 90: D7 Rheumatoid arthritis and related disease
#> 91: D7 Cancer of esophagus
#> 92: D7 Mood disorders
#> 93: D7 Substance-related disorders
#> 94: D8 Complication of device; implant or graft
#> 95: D8 Non-Hodgkin`s lymphoma
#> 96: D8 Paralysis
#> 97: D8 Schizophrenia and other psychotic disorders
#> ID CCS_CATEGORY_DESCRIPTION
#> firstCaseDate endCaseDate count period
#> 1: 2009-07-25 2013-12-20 5 1609 days
#> 2: 2006-11-29 2014-09-24 5 2856 days
#> 3: 2007-11-04 2012-07-30 5 1730 days
#> 4: 2008-03-09 2011-09-03 5 1273 days
#> 5: 2006-05-14 2015-06-29 5 3333 days
#> 6: 2006-04-29 2025-02-02 5 6854 days
#> 7: 2006-11-28 2014-12-21 5 2945 days
#> 8: 2007-05-25 2023-05-12 4 5831 days
#> 9: 2008-06-28 2008-06-28 1 0 days
#> 10: 2007-04-15 2013-08-18 4 2317 days
#> 11: 2014-12-05 2014-12-05 1 0 days
#> 12: 2007-02-19 2014-07-03 5 2691 days
#> 13: 2012-06-08 2012-06-08 1 0 days
#> 14: 2007-04-05 2014-03-04 4 2525 days
#> 15: 2011-09-20 2020-05-22 5 3167 days
#> 16: 2008-07-08 2014-02-24 5 2057 days
#> 17: 2006-10-20 2015-03-09 5 3062 days
#> 18: 2009-09-10 2020-01-24 5 3788 days
#> 19: 2007-10-01 2015-07-12 5 2841 days
#> 20: 2007-02-01 2014-08-14 4 2751 days
#> 21: 2012-03-31 2012-03-31 1 0 days
#> 22: 2007-11-22 2015-10-27 5 2896 days
#> 23: 2007-03-05 2013-11-09 4 2441 days
#> 24: 2008-12-19 2008-12-19 1 0 days
#> 25: 2015-12-26 2023-08-28 4 2802 days
#> 26: 2023-11-18 2024-02-12 2 86 days
#> 27: 2016-09-07 2016-09-07 1 0 days
#> 28: 2016-08-08 2024-03-04 5 2765 days
#> 29: 2016-03-20 2024-09-20 5 3106 days
#> 30: 2024-04-07 2024-04-07 1 0 days
#> 31: 2019-05-07 2025-05-25 6 2210 days
#> 32: 2015-12-02 2025-07-21 6 3519 days
#> 33: 2018-05-07 2025-01-12 2 2442 days
#> 34: 2015-12-05 2015-12-05 1 0 days
#> 35: 2016-08-29 2016-08-29 1 0 days
#> 36: 2016-07-05 2025-02-21 2 3153 days
#> 37: 2020-12-25 2022-11-20 2 695 days
#> 38: 2018-02-13 2018-02-13 1 0 days
#> 39: 2023-12-18 2023-12-18 1 0 days
#> 40: 2025-02-20 2025-02-20 1 0 days
#> 41: 2019-09-28 2019-09-28 1 0 days
#> 42: 2022-05-30 2024-12-12 3 927 days
#> 43: 2020-02-28 2020-02-28 1 0 days
#> 44: 2025-09-17 2025-09-17 1 0 days
#> 45: 2016-09-09 2016-09-09 1 0 days
#> 46: 2020-03-24 2020-03-24 1 0 days
#> 47: 2018-12-19 2018-12-19 1 0 days
#> 48: 2018-01-16 2018-01-16 1 0 days
#> 49: 2021-10-22 2021-10-22 1 0 days
#> 50: 2024-02-07 2024-02-07 1 0 days
#> 51: 2021-04-06 2021-04-06 1 0 days
#> 52: 2015-12-06 2015-12-06 1 0 days
#> 53: 2024-09-05 2024-09-05 1 0 days
#> 54: 2025-09-05 2025-09-05 1 0 days
#> 55: 2017-08-29 2017-08-29 1 0 days
#> 56: 2020-08-12 2020-08-12 1 0 days
#> 57: 2017-12-19 2017-12-19 1 0 days
#> 58: 2022-10-23 2022-10-23 1 0 days
#> 59: 2022-01-23 2022-09-27 2 247 days
#> 60: 2020-02-01 2020-02-01 1 0 days
#> 61: 2017-12-24 2017-12-24 1 0 days
#> 62: 2022-12-01 2022-12-01 1 0 days
#> 63: 2024-12-24 2024-12-24 1 0 days
#> 64: 2021-02-26 2024-07-15 2 1235 days
#> 65: 2016-12-06 2016-12-06 1 0 days
#> 66: 2024-04-04 2024-04-04 1 0 days
#> 67: 2006-02-12 2006-02-12 1 0 days
#> 68: 2011-06-18 2011-06-18 1 0 days
#> 69: 2023-10-23 2023-10-23 1 0 days
#> 70: 2022-09-15 2022-09-15 1 0 days
#> 71: 2019-10-13 2019-10-13 1 0 days
#> 72: 2016-11-21 2016-11-21 1 0 days
#> 73: 2024-01-27 2024-01-27 1 0 days
#> 74: 2017-11-19 2017-11-19 1 0 days
#> 75: 2016-01-22 2016-01-22 1 0 days
#> 76: 2014-03-23 2014-03-23 1 0 days
#> 77: 2022-02-22 2022-02-22 1 0 days
#> 78: 2020-03-10 2020-03-10 1 0 days
#> 79: 2019-01-03 2019-01-03 1 0 days
#> 80: 2020-01-12 2020-01-12 1 0 days
#> 81: 2020-10-06 2020-10-06 1 0 days
#> 82: 2021-02-13 2021-02-13 1 0 days
#> 83: 2022-10-10 2022-10-10 1 0 days
#> 84: 2014-11-15 2014-11-15 1 0 days
#> 85: 2013-07-16 2013-07-16 1 0 days
#> 86: 2015-10-29 2015-10-29 1 0 days
#> 87: 2024-05-21 2024-05-21 1 0 days
#> 88: 2005-10-09 2005-10-09 1 0 days
#> 89: 2014-06-25 2014-06-25 1 0 days
#> 90: 2021-12-03 2021-12-03 1 0 days
#> 91: 2012-07-04 2012-07-04 1 0 days
#> 92: 2012-01-25 2012-01-25 1 0 days
#> 93: 2007-05-22 2007-05-22 1 0 days
#> 94: 2021-03-18 2021-03-18 1 0 days
#> 95: 2025-09-10 2025-09-10 1 0 days
#> 96: 2010-09-27 2010-09-27 1 0 days
#> 97: 2007-01-30 2007-01-30 1 0 days
#> firstCaseDate endCaseDate count period
#>
#> $Error
#> ICD count IcdVersionInFile WrongType Suggestion
#> 1: A0.11 20 ICD 10 Wrong format
#> 2: V27.0 18 ICD 10 Wrong version
#> 3: E114 8 ICD 10 Wrong format
#> 4: A01.05 8 ICD 9 Wrong version
#> 5: 42761 7 ICD 10 Wrong version
#> 6: Z9.90 6 ICD 10 Wrong format
#> 7: F42 6 ICD 10 Wrong format
#> 8: V24.1 6 ICD 10 Wrong version
#> 9: A0105 5 ICD 9 Wrong version
#> 10: 001 5 ICD 9 Wrong format 0019
#> 11: 75.52 4 ICD 9 Wrong format
#> 12: E03.0 4 ICD 9 Wrong version
#> 13: 650 4 ICD 10 Wrong version
#> 14: 123.45 3 ICD 10 Wrong format
#> 15: 755.2 3 ICD 9 Wrong format 755.29
#> 16: 7552 2 ICD 9 Wrong format 75529
#>
# Group diagnostic codes into multiple levels of CCS classification
icdDxToCCSLvl(sampleDxFile, ID, ICD, Date, icdVerColName = NULL, "2015-10-01", 2, TRUE)
#> Wrong ICD format: total 9 ICD codes (the number of occurrences is in brackets)
#> c("A0.11 (20)", "E114 (8)", "Z9.90 (6)", "F42 (6)", "001 (5)", "75.52 (4)", "755.2 (3)", "123.45 (3)", "7552 (2)")
#>
#> Wrong ICD version: total 7 ICD codes (the number of occurrences is in brackets)
#> c("V27.0 (18)", "A01.05 (8)", "42761 (7)", "V24.1 (6)", "A0105 (5)", "E03.0 (4)", "650 (4)")
#>
#> Warning: The ICD mentioned above matches to "NA" due to the format or other issues.
#> Warning: "Wrong ICD format" means the ICD has wrong format
#> Warning: "Wrong ICD version" means the ICD classify to wrong ICD version (cause the "icd10usingDate" or other issues)
#> $groupedDT
#> Short ID ICD Date CCS_LVL_2_LABEL
#> 1: Z992 A2 Z992 2020-05-22 Diseases of the urinary system
#> 2: Z992 A5 Z992 2020-01-24 Diseases of the urinary system
#> 3: Z992 A8 Z992 2015-10-27 Diseases of the urinary system
#> 4: Z992 A13 Z992 2020-04-26 Diseases of the urinary system
#> 5: Z992 A13 Z992 2025-02-02 Diseases of the urinary system
#> ---
#> 296: 650 C2 650 2017-10-10 <NA>
#> 297: 650 D4 650 2022-04-04 <NA>
#> 298: 123.45 C3 123.45 2022-09-28 <NA>
#> 299: 123.45 D8 123.45 2018-06-17 <NA>
#> 300: 123.45 C0 123.45 2017-05-09 <NA>
#>
#> $summarised_groupedDT
#> ID CCS_LVL_2_LABEL
#> 1: A0 Diseases of the urinary system
#> 2: A1 Diseases of the urinary system
#> 3: A10 Diseases of the urinary system
#> 4: A11 Diseases of the urinary system
#> 5: A12 Diseases of the urinary system
#> 6: A13 Diseases of the urinary system
#> 7: A14 Diseases of the urinary system
#> 8: A15 Diseases of the urinary system
#> 9: A16 Diseases of the urinary system
#> 10: A17 Diseases of the urinary system
#> 11: A18 Diseases of the urinary system
#> 12: A2 Diseases of the urinary system
#> 13: A3 Diseases of the urinary system
#> 14: A4 Diseases of the urinary system
#> 15: A5 Diseases of the urinary system
#> 16: A6 Diseases of the urinary system
#> 17: A7 Diseases of the urinary system
#> 18: A8 Diseases of the urinary system
#> 19: A9 Diseases of the urinary system
#> 20: B0 Diseases of the urinary system
#> 21: B1 Diseases of the urinary system
#> 22: B2 Diseases of the urinary system
#> 23: B3 Diseases of the urinary system
#> 24: B4 Diseases of the urinary system
#> 25: C0 Cancer of skin
#> 26: C0 Cancer of urinary organs
#> 27: C0 Cancer; other primary
#> 28: C1 Cancer; other primary
#> 29: C1 Cancer of breast
#> 30: C1 Cancer of bronchus; lung
#> 31: C1 Cancer of skin
#> 32: C2 Cancer; other primary
#> 33: C2 Cancer of bronchus; lung
#> 34: C2 Malignant neoplasm without specification of site
#> 35: C2 Anxiety disorders
#> 36: C3 Cancer of skin
#> 37: C3 Colorectal cancer
#> 38: C3 Cancer of urinary organs
#> 39: C3 Cancer of breast
#> 40: C4 Cancer of uterus and cervix
#> 41: C4 Cancer of urinary organs
#> 42: C4 Cancer of male genital organs
#> 43: C4 Cancer of skin
#> 44: C4 Cancer of breast
#> 45: C4 Cancer; other primary
#> 46: C4 Anxiety disorders
#> 47: D0 Non-traumatic joint disorders
#> 48: D0 Gastrointestinal hemorrhage
#> 49: D0 Mood disorders
#> 50: D0 Spondylosis; intervertebral disc disorders; other back problems
#> 51: D0 Anxiety disorders
#> 52: D1 Non-traumatic joint disorders
#> 53: D1 Liver disease
#> 54: D1 Hypertension
#> 55: D1 Nutritional deficiencies
#> 56: D2 Complications mainly related to pregnancy
#> 57: D2 Substance-related disorders
#> 58: D2 Cancer of lymphatic and hematopoietic tissue
#> 59: D2 Diseases of the heart
#> 60: D3 Epilepsy; convulsions
#> 61: D3 Complications
#> 62: D3 Other nutritional; endocrine; and metabolic disorders
#> 63: D3 Schizophrenia other psychotic disorders
#> 64: D3 Anxiety disorders
#> 65: D4 Cancer of lymphatic and hematopoietic tissue
#> 66: D4 Diabetes mellitus with complications
#> 67: D4 Complications mainly related to pregnancy
#> 68: D4 Cerebrovascular disease
#> 69: D5 Cancer of lymphatic and hematopoietic tissue
#> 70: D5 Non-traumatic joint disorders
#> 71: D5 Asthma
#> 72: D5 Diseases of the heart
#> 73: D6 Diabetes mellitus with complications
#> 74: D6 Non-traumatic joint disorders
#> 75: D6 Substance-related disorders
#> 76: D6 Hereditary degenerative nervous system conditions
#> 77: D7 Non-traumatic joint disorders
#> 78: D7 Other gastrointestinal cancer
#> 79: D7 Mood disorders
#> 80: D7 Substance-related disorders
#> 81: D8 Complications
#> 82: D8 Cancer of lymphatic and hematopoietic tissue
#> 83: D8 Paralysis
#> 84: D8 Schizophrenia other psychotic disorders
#> ID CCS_LVL_2_LABEL
#> firstCaseDate endCaseDate count period
#> 1: 2009-07-25 2013-12-20 5 1609 days
#> 2: 2006-11-29 2014-09-24 5 2856 days
#> 3: 2007-11-04 2012-07-30 5 1730 days
#> 4: 2008-03-09 2011-09-03 5 1273 days
#> 5: 2006-05-14 2015-06-29 5 3333 days
#> 6: 2006-04-29 2025-02-02 5 6854 days
#> 7: 2006-11-28 2014-12-21 5 2945 days
#> 8: 2007-05-25 2023-05-12 5 5831 days
#> 9: 2007-04-15 2014-12-05 5 2791 days
#> 10: 2007-02-19 2014-07-03 5 2691 days
#> 11: 2007-04-05 2014-03-04 5 2525 days
#> 12: 2011-09-20 2020-05-22 5 3167 days
#> 13: 2008-07-08 2014-02-24 5 2057 days
#> 14: 2006-10-20 2015-03-09 5 3062 days
#> 15: 2009-09-10 2020-01-24 5 3788 days
#> 16: 2007-10-01 2015-07-12 5 2841 days
#> 17: 2007-02-01 2014-08-14 5 2751 days
#> 18: 2007-11-22 2015-10-27 5 2896 days
#> 19: 2007-03-05 2013-11-09 5 2441 days
#> 20: 2015-12-26 2024-02-12 6 2970 days
#> 21: 2016-08-08 2024-03-04 6 2765 days
#> 22: 2016-03-20 2024-09-20 6 3106 days
#> 23: 2019-05-07 2025-05-25 6 2210 days
#> 24: 2015-12-02 2025-07-21 6 3519 days
#> 25: 2018-05-07 2025-01-12 2 2442 days
#> 26: 2015-12-05 2015-12-05 1 0 days
#> 27: 2016-07-05 2025-02-21 3 3153 days
#> 28: 2018-02-13 2022-11-20 3 1741 days
#> 29: 2023-12-18 2023-12-18 1 0 days
#> 30: 2025-02-20 2025-02-20 1 0 days
#> 31: 2019-09-28 2019-09-28 1 0 days
#> 32: 2016-09-09 2024-12-12 4 3016 days
#> 33: 2020-02-28 2020-02-28 1 0 days
#> 34: 2025-09-17 2025-09-17 1 0 days
#> 35: 2020-03-24 2020-03-24 1 0 days
#> 36: 2018-12-19 2024-02-07 2 1876 days
#> 37: 2015-12-06 2018-01-16 2 772 days
#> 38: 2021-10-22 2021-10-22 1 0 days
#> 39: 2021-04-06 2021-04-06 1 0 days
#> 40: 2024-09-05 2024-09-05 1 0 days
#> 41: 2025-09-05 2025-09-05 1 0 days
#> 42: 2017-08-29 2017-08-29 1 0 days
#> 43: 2020-08-12 2020-08-12 1 0 days
#> 44: 2017-12-19 2017-12-19 1 0 days
#> 45: 2022-10-23 2022-10-23 1 0 days
#> 46: 2022-01-23 2022-09-27 2 247 days
#> 47: 2020-02-01 2020-02-01 1 0 days
#> 48: 2017-12-24 2017-12-24 1 0 days
#> 49: 2022-12-01 2022-12-01 1 0 days
#> 50: 2024-12-24 2024-12-24 1 0 days
#> 51: 2021-02-26 2024-07-15 2 1235 days
#> 52: 2016-12-06 2016-12-06 1 0 days
#> 53: 2024-04-04 2024-04-04 1 0 days
#> 54: 2006-02-12 2006-02-12 1 0 days
#> 55: 2011-06-18 2011-06-18 1 0 days
#> 56: 2023-10-23 2023-10-23 1 0 days
#> 57: 2022-09-15 2022-09-15 1 0 days
#> 58: 2019-10-13 2019-10-13 1 0 days
#> 59: 2016-11-21 2016-11-21 1 0 days
#> 60: 2024-01-27 2024-01-27 1 0 days
#> 61: 2017-11-19 2017-11-19 1 0 days
#> 62: 2016-01-22 2016-01-22 1 0 days
#> 63: 2014-03-23 2014-03-23 1 0 days
#> 64: 2022-02-22 2022-02-22 1 0 days
#> 65: 2020-03-10 2020-03-10 1 0 days
#> 66: 2019-01-03 2019-01-03 1 0 days
#> 67: 2020-01-12 2020-01-12 1 0 days
#> 68: 2020-10-06 2020-10-06 1 0 days
#> 69: 2021-02-13 2021-02-13 1 0 days
#> 70: 2022-10-10 2022-10-10 1 0 days
#> 71: 2014-11-15 2014-11-15 1 0 days
#> 72: 2013-07-16 2013-07-16 1 0 days
#> 73: 2015-10-29 2015-10-29 1 0 days
#> 74: 2024-05-21 2024-05-21 1 0 days
#> 75: 2005-10-09 2005-10-09 1 0 days
#> 76: 2014-06-25 2014-06-25 1 0 days
#> 77: 2021-12-03 2021-12-03 1 0 days
#> 78: 2012-07-04 2012-07-04 1 0 days
#> 79: 2012-01-25 2012-01-25 1 0 days
#> 80: 2007-05-22 2007-05-22 1 0 days
#> 81: 2021-03-18 2021-03-18 1 0 days
#> 82: 2025-09-10 2025-09-10 1 0 days
#> 83: 2010-09-27 2010-09-27 1 0 days
#> 84: 2007-01-30 2007-01-30 1 0 days
#> firstCaseDate endCaseDate count period
#>
#> $Error
#> ICD count IcdVersionInFile WrongType Suggestion
#> 1: A0.11 20 ICD 10 Wrong format
#> 2: V27.0 18 ICD 10 Wrong version
#> 3: E114 8 ICD 10 Wrong format
#> 4: A01.05 8 ICD 9 Wrong version
#> 5: 42761 7 ICD 10 Wrong version
#> 6: Z9.90 6 ICD 10 Wrong format
#> 7: F42 6 ICD 10 Wrong format
#> 8: V24.1 6 ICD 10 Wrong version
#> 9: A0105 5 ICD 9 Wrong version
#> 10: 001 5 ICD 9 Wrong format 0019
#> 11: 75.52 4 ICD 9 Wrong format
#> 12: E03.0 4 ICD 9 Wrong version
#> 13: 650 4 ICD 10 Wrong version
#> 14: 123.45 3 ICD 10 Wrong format
#> 15: 755.2 3 ICD 9 Wrong format 755.29
#> 16: 7552 2 ICD 9 Wrong format 75529
#>